PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_003368-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family MYB_related
Protein Properties Length: 344aa    MW: 37085.6 Da    PI: 7.1701
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_003368-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.91.1e-13103147347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ Iar +   Rt+ q+ s+ qky
    NNU_003368-RA 103 PWTEEEHRLFLMGLQKLGKGDWRGIARNFVMSRTPTQVASHAQKY 147
                      8*****************************99************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129419.96696152IPR017930Myb domain
SuperFamilySSF466896.43E-1798153IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-1899151IPR006447Myb domain, plants
SMARTSM007171.2E-11100150IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.7E-12100146IPR009057Homeodomain-like
PfamPF002491.1E-11103147IPR001005SANT/Myb domain
CDDcd001678.50E-10103148No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MTRRCSHCSN NGHNSRTCPM RGGLKLFGVR LTDGSIKKSA SMGNLSSAHY YSSSSAAASA  60
NSSSPPSDPL RDPTPVADGY VSDDPVHASC SSNCRSERKK GVPWTEEEHR LFLMGLQKLG  120
KGDWRGIARN FVMSRTPTQV ASHAQKYFIR QSNSTRRKRR SSLFDMVPDM SIDPTTVTEE  180
QSLLHSSQAG ESENVNLLPP LHLSLDQECE PMETTSDETV KADEGVTSSN ILPMIPTLFP  240
AYLPAAFPFW PPSLAPAVGE NVGEISHHQV LKPTPIHSKD PVNVDELVGL STLSLGDVAT  300
GRMEPSALTL QLIGAPSKQS AFHANPPISR SDLSNSGSSA IHAV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010249506.10.0PREDICTED: uncharacterized protein LOC104592058
TrEMBLV4SSM01e-144V4SSM0_9R
STRINGGLYMA13G43120.11e-139(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.18e-94MYB_related family protein